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Core pipeline

rri_pipeline_st()
Holobiont Redox Resilience Index (RRI) with Spatio-Temporal Dynamics

Simulation

simulate_redox_holobiont()
Simulate a Holobiont Redox Dataset with Spatio-Temporal Structure
redoxrri_example
Example workflow for RedoxRRI

Visualization

plot_RRI_ternary()
Ternary Plot of Holobiont Redox Resilience Allocation
theme_ems()
EMS plotting theme

Diagnostics

rri_latent_correlation()
Latent Recovery Correlation for RedoxRRI
rri_compensation_index()
Cross-Domain Compensation Index
rri_sensitivity()
Sensitivity Analysis for RedoxRRI